Another question about twinned maps
Pavel-
Another related question... Does the option for Fill Missing F(Obs) with
F(Calc) work for twinned maps? If I turn it on, I don't get an error but
the maps don't seem any different.
Just wondering,
Thanks,
Mary
On Mon, Mar 21, 2011 at 11:44 AM, Pavel Afonine
Hi Mary,
I'm not sure map sharpening is done in case of twinning (otherwise it is an option that you can turn on/off either in phenix.refine or in more specific tool for maps calculation called phenix.maps). I will check this later today and reply.
Pavel.
On 3/21/11 8:08 AM, Mary Ho wrote:
I'm using phenix-1.7-650. When phenix.refine generates the detwinned maps with apply B-factor sharpening on and no value inputed, is the value the program uses for sharpening output anywhere?
Thanks,
Mary X. Ho Postdoctoral Associate Arnold Lab Rutgers
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Hi Mary, no, this is not done if the data is from twinned crystal. Maps already can be model biased due to detwinning (if twin-fraction is close to 0.5) so I didn't want it to be even worse Pavel. On 3/22/11 5:51 AM, Mary Ho wrote:
Pavel-
Another related question... Does the option for Fill Missing F(Obs) with F(Calc) work for twinned maps? If I turn it on, I don't get an error but the maps don't seem any different.
Just wondering,
Thanks,
Mary
On Mon, Mar 21, 2011 at 11:44 AM, Pavel Afonine
mailto:[email protected]> wrote: Hi Mary,
I'm not sure map sharpening is done in case of twinning (otherwise it is an option that you can turn on/off either in phenix.refine or in more specific tool for maps calculation called phenix.maps). I will check this later today and reply.
Pavel.
On 3/21/11 8:08 AM, Mary Ho wrote:
I'm using phenix-1.7-650. When phenix.refine generates the detwinned maps with apply B-factor sharpening on and no value inputed, is the value the program uses for sharpening output anywhere?
Thanks,
Mary X. Ho Postdoctoral Associate Arnold Lab Rutgers
_______________________________________________ phenixbb mailing list [email protected] mailto:[email protected] http://phenix-online.org/mailman/listinfo/phenixbb
participants (2)
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Mary Ho
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Pavel Afonine