View DM map from AutoSol gui?
I'm not a GUI kind of person but today I'm messing around with it. After AutoSol (with build=False... errr AutoBuild unchecked), I have an opportunity to 'View sites and experimental map' in coot or PyMOL. Wouldn't it be more useful if the gui loaded the DM maps as well? F --------------------------------------------- Francis Reyes M.Sc. 215 UCB University of Colorado at Boulder gpg --keyserver pgp.mit.edu --recv-keys 67BA8D5D 8AE2 F2F4 90F7 9640 28BC 686F 78FD 6669 67BA 8D5D
On Wed, May 19, 2010 at 1:33 PM, Francis E Reyes wrote: After AutoSol (with build=False... errr AutoBuild unchecked), I have an
opportunity to 'View sites and experimental map' in coot or PyMOL. Wouldn't
it be more useful if the gui loaded the DM maps as well? Which version were you using? There was a bug that prevented the density
modification results from being listed when building was turned off; this is
now fixed in the nightly builds. However, if you click the Coot button in
the summary tab, you'll still get the overall_best DM map, you just won't
get a choice of solutions. (It may be possible to view the individual
RESOLVE outputs by right-clicking on the magnifying glass icon next to each
file in the list - but I need to double-check this.)
-Nat
dev-386. Must have been fixed recently? F On May 19, 2010, at 2:43 PM, Nathaniel Echols wrote:
On Wed, May 19, 2010 at 1:33 PM, Francis E Reyes
wrote: After AutoSol (with build=False... errr AutoBuild unchecked), I have an opportunity to 'View sites and experimental map' in coot or PyMOL. Wouldn't it be more useful if the gui loaded the DM maps as well?
Which version were you using? There was a bug that prevented the density modification results from being listed when building was turned off; this is now fixed in the nightly builds. However, if you click the Coot button in the summary tab, you'll still get the overall_best DM map, you just won't get a choice of solutions. (It may be possible to view the individual RESOLVE outputs by right- clicking on the magnifying glass icon next to each file in the list - but I need to double-check this.)
-Nat _______________________________________________ phenixbb mailing list [email protected] http://phenix-online.org/mailman/listinfo/phenixbb
--------------------------------------------- Francis Reyes M.Sc. 215 UCB University of Colorado at Boulder gpg --keyserver pgp.mit.edu --recv-keys 67BA8D5D 8AE2 F2F4 90F7 9640 28BC 686F 78FD 6669 67BA 8D5D
On Wed, May 19, 2010 at 1:57 PM, Francis E Reyes wrote: dev-386. Must have been fixed recently? Last week, I think. As a general rule, if you're using the nightly builds,
you should update relatively often - more than two weeks old is probably
obsolete already. The AutoSol GUI in particular looks much different now.
(The base pair restraints also work better, although still mostly limited
to canonical WC pairs.)
-Nat
participants (2)
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Francis E Reyes
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Nathaniel Echols