Hi Simonas, could you please send me model and map, and tell what ring gets distorted. I will investigate this once I have files. If files are too large to send via email please use one of available file sharing tools such as Dropbox. Pavel On 7/5/16 04:07, Simonas Masiulis wrote:

Hi,

I want to refine N-linked glycans into an EM density using Phenix.real_space_refine, but it seems the rings get distorted. Does anybody know how to fix this (e.g., is there a way to provide a .cif file)?

Thanks a lot!

Simonas