Hi, Is there only the command line version of this or the GUI usage is available as well? Best Regards, Oarabile Kgosisejo ________________________________________ From: [email protected] [[email protected]] on behalf of Pavel Afonine [[email protected]] Sent: January 20, 2015 1:58 PM To: PC; PHENIX list Subject: Re: [phenixbb] idealizing structure
Is there a way to "idealize" a structure in Phenix?
I mean, ideal omega, all residues within allowed regions of Ramachandran maps, no clashes..etc. I know it won't fit the map well but I would like to see what it looks like.
Yes, using phenix.geometry_minimization : http://phenix-online.org/documentation/reference/geometry_minimization.html Pavel _______________________________________________ phenixbb mailing list [email protected] http://phenix-online.org/mailman/listinfo/phenixbb