Dear all,
I have a metal compound interacting
with a protein and I am facing the following problem.
Initially, the metal is equatorially
complexed with chlorides, which are progressively exchanged
by water molecules. This hydrolysis is clear from our
spectroscopic analysis, but also from the anomalous maps,
which show weaker peaks for the most exposed chlorides.
The question regarding phenix.refine
is:
How can I refine the occupancies of
the alternative species (chlorides and water molecules) and
to constrain their sum into the occupancy of the metal,
which is also under refinement?
I cannot find the proper selection
syntax to deal with this situation.
Can you help me on that?
Thank you in advance.
Petros
P.S. I remember I could treat this
kind of problem with shelxl but it has been a lot of time
since I last used shelxl for high resolution protein
refinement and I would not like to go back.