Yes, this trivial combination of two commands will do it: phenix.pdbtools model.pdb keep=protein output.file_name=protein_only.pdb phenix.pdbtools model.pdb keep=rna output.file_name=rna_only.pdb phenix.pdbtools model.pdb keep=water output.file_name=water_only.pdb then do --show-adp-statistics phenix.pdbtools protein_only.pdb --show-adp-statistics phenix.pdbtools rna_only.pdb --show-adp-statistics phenix.pdbtools water_only.pdb --show-adp-statistics Pavel. On 4/27/10 9:08 AM, Raja Dey wrote:
Hi, I need the values of B factors for Protein and DNA part separately in a Protein-DNA complex to prepare Table 1. I am not sure if PHENIX is doing that calculation. Can anyone tell me how I can get those values? Thanks...
Raja
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