Hello,
I am trying to install phenix on a Debian 9 linux machine, but I
get systematically an error message from install :
# ./install --prefix=/home/wpb/phenix/
==========================================================================
Phenix Installation
version: 1.12-2829
machine type: intel-linux-2.6-x86_64
OS version: 4.9.0-12-amd64
destination:
/home/wpb/phenix/phenix-1.12-2829
# of processors: 8
=========================================================================
Configuring Phenix components.
Traceback (most recent call last):
File "./bin/install.py", line 275, in <module>
installer(sys.argv[1:]).install()
File
"/home/wpb/mounts/ibs-equipe-burmeister/phenix/phenix-installer-1.12-2829-intel-linux-2.6-x86_64-centos6/lib/libtbx/auto_build/install_distribution.py",
line 197, in install
self.install_from_binary()
File
"/home/wpb/mounts/ibs-equipe-burmeister/phenix/phenix-installer-1.12-2829-intel-linux-2.6-x86_64-centos6/lib/libtbx/auto_build/install_distribution.py",
line 319, in install_from_binary
self.reconfigure(log=log)
File
"/home/wpb/mounts/ibs-equipe-burmeister/phenix/phenix-installer-1.12-2829-intel-linux-2.6-x86_64-centos6/lib/libtbx/auto_build/install_distribution.py",
line 485, in reconfigure
call(args=args, log=log, verbose=self.options.verbose)
File
"/home/wpb/mounts/ibs-equipe-burmeister/phenix/phenix-installer-1.12-2829-intel-linux-2.6-x86_64-centos6/lib/libtbx/auto_build/installer_utils.py",
line 81, in call
raise RuntimeError("Call to '%s' failed with exit code %d" %
(args, rc))
RuntimeError: Call to
'/home/wpb/phenix/phenix-1.12-2829/base/bin/python
/home/wpb/phenix/phenix-1.12-2829/modules/cctbx_project/libtbx/configure.py
--current_working_directory
/home/wpb/phenix/phenix-1.12-2829/build --command_version_suffix
1.12-2829 phenix phaser solve_resolve labelit dials xia2 iota
prime' failed with exit code 126
Does this ring a bell for somebody ?
There is an old post (2016) with the same problem, but without
an answer.
I tried to install the most recent version of phenix or an
older one (down to v10), also chosing directories with shorter
paths, but the problem is always the same.
Best regards
Wim
--
Wim
Burmeister
Professeur
Institut
de Biologie Structurale (IBS) CIBB
71
avenue des Martyrs / CS 20192
38044 Grenoble Cedex 9,
FRANCE
E-mail: [email protected]
Tel: +33 (0) 457 42 87 41
Fax: +33 (0) 476 20 94 00
Changement
climatique : «Les autres combats n’ont
aucun sens si celui-là est perdu» (Aurélien
Barrau)