I think you can change
refinement.ordered_solvent.primary_map_cutoff
from 3 to 3.5 or 4 maybe
and maybe raise
refinement.ordered_solvent.secondary_map_cutoff
to 1.5 or so.
I think this will work:
phenix.refine secondary_map_cutoff=<whatever> primary_map_cutoff=<whatever> <other keywords>
HTH
Peter
----- Original Message -----
From: "Schubert, Carsten [PRDUS]"
Hi,
is it possible to increase the stringency criteria for picked waters, besides increasing the sigma level? E.G. something on the order of the H-bonding criterion found in CNS? I find that the automated water- pickingroutine gives me quite a few waters, which are not necessarily justified by visual inspection of the maps.
Thanks
Carsten