On Mon, May 5, 2014 at 12:44 PM, Oliver Clarke <olibclarke@gmail.com> wrote:

I am struggling a little to get Rosetta and phenix to play happily with one another (I’d like to use the phenix.rosetta_refine module).

I am currently using the latest nightlies of phenix (1.9-1690) and rosetta (2014.16.56682), and I run into errors (reproduced below) when attempting to build the phenix-rosetta interface.

Does anyone have any insights as to how to fix this problem, or suggestions as to which pair of phenix and rosetta versions are known to be compatible with one another?

The key line is this:

cc1plus: all warnings being treated as errors

because someone had the bright idea to add the "-Werror" flag. (Actually, it's a useful option to have, but not so useful when deploying source-only software on a wide range of systems that you don't have access to.) I think you can fix it by editing one of the settings files:

find . -name "basic.settings"

and comment out the lines containing "Werror".

The versions you're using should be okay otherwise, but I will double-check. My next big project is to refactor our nightly build system, which will include testing the live Rosetta code along with the rest of Phenix. (We still can't distribute it, though.)

-Nat