i have now used phenix to read in the mtz file, read all the arrays
and make a new mtz file.
phenix recognised the HLs as Hend/latt coeffs.
i used the eff file to run phenix.refine at the command line
and got this error
Not a suitable array of experimental phases: refinement.input.experimental_phases.labels=HLA,HLB,HLC,HL
The phases were orginally derived by Phenix using the auto solve GUI.
NDM Senior Reseach Fellow Diamond Research Fellow
Jon
Dr. Jonathan M. Grimes,
University Research Lecturer Diamond Light Source
Division of Structural Biology Diamond House
Wellcome Trust Centre for Human Genetics Harwell Science Campus
University of Oxford Didcot
Roosevelt Drive, OX11 0DE
Oxford OX3 7BN, UK
Email: Jonathan@strubi.ox.ac.uk, Web: www.strubi.ox.ac.uk
Tel: (+44) - 1865 - 287561, FAX: (+44) - 1865 - 287547
---- Original message ----
>Date: Mon, 12 May 2014 11:32:39 +0100
>From: phenixbb-bounces@phenix-online.org (on behalf of Jonathan Grimes <jonathan@strubi.ox.ac.uk>)
>Subject: [phenixbb] HLs not recognised
>To: phenixbb@phenix-online.org
>
>
> I am trying to refine a structure at low resolution and would like to
> use phase restraints. using the GUI even though HLs are present
> in the MTZ file, and are type “A”…checked with CAD…..i am not given
> the option of selecting them.
>
> not clear to me what I’m doing wrong.
>
> hints most wellcome
> thanks
> jon
>
>
>Dr. Jonathan M. Grimes,
>NDM Senior Reseach Fellow
>University Research Lecturer
>DIAMOND Research Fellow
>
>Division of Structural Biology
>Wellcome Trust Centre for Human Genetics
>University of Oxford
>Roosevelt Drive,
>Oxford OX3 7BN, UK
>
>Email: Jonathan@strubi.ox.ac.uk, Web: www.strubi.ox.ac.uk
>Tel: (+44) - 1865 - 287561, FAX: (+44) - 1865 - 287547
>
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