Hi Phoebe, now you should be able to do it using phenix.reciprocal_space_arrays command line tool once the next PHENIX nightly build gets available. Pavel. On 3/21/11 2:23 PM, Phoebe Rice wrote:
How can I get phenix to spit out not just PhiModel but an estimated FOM or fake HL coefficients (without experimental phases - just based on how badly my model agrees with FOBS)? And I'd like the weights in their own personal mtz column(s), not just precombined in a "weighted phi" column.
In case anybody cares why, I'd like to use solvent massaging and domain-wise averaging to remove bias from a low-resolution model-phased map, preferably with DM, unless anybody has a better suggestion. I did rigid body, TLS, etc on the model in phenix, so it seems like phenix has already calculated all the info I want if I could only squeeze it out.
thanks, Phoebe
===================================== Phoebe A. Rice Dept. of Biochemistry& Molecular Biology The University of Chicago phone 773 834 1723 http://bmb.bsd.uchicago.edu/Faculty_and_Research/01_Faculty/01_Faculty_Alpha... http://www.rsc.org/shop/books/2008/9780854042722.asp _______________________________________________ phenixbb mailing list [email protected] http://phenix-online.org/mailman/listinfo/phenixbb