Maybe I'm missing something here, but don't you just import both cif files
(for nucleic acid, and MPD individually) into phenix.refine? Did you try
that?
Kelly Daughtry
*******************************************************
Kelly Daughtry, Ph.D.
Post-Doctoral Fellow, Raetz Lab
Biochemistry Department
Duke University
Alex H. Sands, Jr. Building
303 Research Drive
RM 250
Durham, NC 27710
P: 919-684-5178
*******************************************************
On Mon, Mar 5, 2012 at 12:29 PM, Xue-Yuan Pei
Dear All: I am using phenix-1.7.2 to refine my structure. Now i am facing a problem with .cif file. I could not generate cif files for a modified nucleic acid and MPD at same time with phenix.elbow or phenix.ready_set. If I use phenix.elbow to generate cif file for modefied nucleic acid only, phenix .refine complains about MPD cif not found, same for MPD. If I combine two cif files together, phenix.refine also complains. Is there better to generate cif file containing both modified nucleic acid and MPD? Many thanks for your help, Xue
______________________________**_________________ phenixbb mailing list [email protected] http://phenix-online.org/**mailman/listinfo/phenixbbhttp://phenix-online.org/mailman/listinfo/phenixbb