I get:
@@@@@@ '' @@@@@@
Traceback (most recent call last):
File "PyWAXS.py", line 11, in <module>
import iotbx.pdb
File "/Users/magnus/Downloads/cctbx_sources/iotbx/pdb/__init__.py", line 2, in <module>
from cctbx.array_family import flex
File "/Users/magnus/Downloads/cctbx_sources/cctbx/array_family/flex.py", line 2, in <module>
import scitbx.array_family.flex
File "/Users/magnus/Downloads/cctbx_sources/scitbx/array_family/flex.py", line 2, in <module>
import boost.optional # import dependency
File "/Users/magnus/Downloads/cctbx_sources/boost_adaptbx/boost/optional.py", line 2, in <module>
import boost.python
File "/Users/magnus/Downloads/cctbx_sources/boost_adaptbx/boost/python.py", line 129, in <module>
floating_point_exceptions = floating_point_exceptions()
File "/Users/magnus/Downloads/cctbx_sources/boost_adaptbx/boost/python.py", line 122, in floating_point_exceptions
import libtbx.load_env
File "/Users/magnus/Downloads/cctbx_sources/libtbx/load_env.py", line 5, in <module>
libtbx.env = libtbx.env_config.unpickle()
File "/Users/magnus/Downloads/cctbx_sources/libtbx/env_config.py", line 2195, in unpickle
set_preferred_sys_prefix_and_sys_executable(build_path=build_path)
File "/Users/magnus/Downloads/cctbx_sources/libtbx/env_config.py", line 2111, in set_preferred_sys_prefix_and_sys_executable
if (op.samefile(build_path, dirname)):
File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/posixpath.py", line 162, in samefile
s1 = os.stat(f1)
OSError: [Errno 2] No such file or directory: ''
i.e. looks empty, or?
Magnus
On 04 Jun 2014, at 16:38, Luc Bourhis
I'm afraid I'm not sure what you mean? The directory /Users/magnus/Downloads/cctbx_build does exist.
I am at a loss here, and I worked on some of that code! Could you add the following line
print "@@@@@@ %r @@@@@@" % build_path
as the first line of the function set_preferred_sys_prefix_and_sys_executable in libtbx/env_config.py, please?
Luc
_______________________________________________ cctbxbb mailing list [email protected] http://phenix-online.org/mailman/listinfo/cctbxbb