Dear all,
I encountered an error with phenix.map_value_at_point.
It does not work when ccp4 maps are provided. It works fine
when an mtz file with map coefficients is provided.
Probably this is related to the bug reported last September.
http://phenix-online.org/pipermail/cctbxbb/2015-September/001155.html
It also has a problem that when there are multiple columns in an mtz
file and the specified label does not match any of them, the
last column is used without warning.
phenix.fetch_pdb 3eml
phenix.fetch_pdb -x 3eml
phenix.maps 3eml.pdb 3eml-sf.cif
# Just to use the latest svn version
cctbx.python
~/prog/dials/modules/cctbx_project/mmtbx/command_line/map_value_at_point.py
point="1.0 2.0 3.0" 3eml_2mFo-DFc_map.ccp4
Default params::
label = None
point = None
resolution_factor = 0.25
scale = *sigma volume
resolution = None
low_resolution = None
Map values at specified points:
Traceback (most recent call last):
File
"/mnt/wd_storage/nakane/prog/dials/modules/cctbx_project/mmtbx/command_line/map_value_at_point.py",
line 162, in <module>
run(sys.argv[1:])
File
"/mnt/wd_storage/nakane/prog/dials/modules/cctbx_project/mmtbx/command_line/map_value_at_point.py",
line 146, in run
"%10.3f"%map_3d.eight_point_interpolation(point_frac)).strip()
Boost.Python.ArgumentError: Python argument types in
cctbx_maptbx_ext.eight_point_interpolation(double, tuple)
did not match C++ signature:
eight_point_interpolation(scitbx::af::const_ref